I did this on my 2000, same axle swap. I do have a FSM and as my buddy pointed out while we were doing mine, to blead an ABS system, you HAVE to cycle the ABS pump and solenoids using a Factory Diagnostic Unit (i.e. Dealer Only). Without doing this, you will never get the brakes bled correctly and they will always feel mushy, no matter how much fluid you bleed through.
I ended up pulling the ABS pump, made some new lines with a Tee splicing the front two lines together and over to the prop valve and modifying the rear line from the prop valve to go directly to the M/C. Not too hard to do but you better be very good at doing inverted flaire lines in the car. You can get non ABS front lines from the dealer and only modify the rear but I couldn't figure out how to get the old lines out and new ones in with the engine in the Jeep.
Hope this helps. Good luck!