I thought I'd update... My vibrations are gone. :cheers:
I emailed Rugged Ridge asking for a new kit, they told me they had problems with the length yoke I got in my kit and would send me a new shaft and yoke.
Well, I already ordered a JB SYE because I wasn't going to troubleshoot this kit any more. I installed the JB kit and she's butter smooth now!
BTW the JB kits components have a much nicer fit, finish and seem to be of much higher quality than RR.