I noticed smoother ecceleration through the powerband with the 99+ intake, but not much else. It can help in conjunction with other mods. Didn't notice anything when I bored out my TB either. TB spacer is useless as well.
Free flowing exhaust(get rid of the crimped factory down pipe at the header collector).
An intake is useless without routing it somewhere other than in the factory spot. It'll just suck the hot manifold air, so something to the other side of the engine bay would work best.
Larger injectors wont do much if the engine doesn't demand more fuel. Stock ones are rated at 23.6 or so anyways.
A teardown of the engine with a cam replacement, headwork, more compression, ect.. can land you more power numbers but will result in emptying your wallet.
No bolt ons that are cheapish will net you huge gains in power numbers(exc. NOS, its cheapish).