If my transmission fell out of my truck...I wouldn't take it to AAMCO...even if it were free. My personal opinion of course.
Aamco
WILL tell you need a new transmission for $3500. Even if it's not your tranny...it's what they do.
They told my father in law he needed a new tranny for $3550. It was 2 quarts of fluid low and a little brownish, I drained and filled it for him. He then drove it to Texas and back with no issues. Ran fine until he sold it a few years later.
My son went to Aamco with his older Camry, they said new tranny, $3600. Local shop fixed him up with a used tranny for $300, plus R & R $550. $850. That was 4 years ago, still going strong.
Advice - If you haven't already...do some actual troubleshooting...buy a manual. AW4's are extremely hardy and durable. Don't just assume your tranny is shot. Check the fluid color/smell/level. If it runs smooth when cruising it likely not a huge issue.
http://www.pacificcoastmanuals.com/jeep_comanche_service_manuals.html
Research transmissions a little, so when you go to talk to a tranny shop you'll have an idea of what they're talking about.