The transmissions are the same interally - the output spline differs (21 spline vs 23 spline, breaking for the 1991 MY. Details have been given by others.)
The TPS difference is simple - RENIX "split" the TPS because the TCU was not integrated into the ECU. That's for 1987-1990.
For 1991-up, I seem to recall that ChryCo integrated the TCU into the SBEC/ECU, eliminating the need for the "split" TPS. The RENIX M/T and A/T TPS units are the same - the difference is that the A/T version has two outputs to the M/T single output (I have an A/T TPS on my 88 - with Peugeot gearbox - that just leaves the second connector "loose." I think I tied it into a condom to keep it clean - I suppose I really should do a little better. I'm used to using condoms on plugs and such from my days in demolition...)
5-90