You need different driveshafts as well, and in a '90 that came with an AX15 you're going to need a 23 spline AW4. If you want an OEM level install it'll be pretty in depth and annoying, but if you can do fine without the TCU and don't mind using an RADesigns shifter or similar, you get a lot more leeway and the swap's much simpler.
Stuff you need, off the top of my head, probably forgetting some things:
* RENIX flexplate
* tranny, torque converter - make sure the throttle valve cable on the trans isn't damaged and has the ferrule to clip onto the throttle linkage. You may need a RENIX era specific throttle valve cable, I'm not sure. Aim for a 91-97 trans (since you need 23 spline output shaft) if doing an OEM level install with the TCU, you can use up to an 01 trans if you are using a manual shifter like the RADesigns one.
* cooler lines (dorman 624-300, 624-301, 624-334, and 2x 800-714)
* possibly an automatic radiator (if yours is getting corroded badly anyways) or a large external cooler
* front and rear driveshafts from an auto 4.0 with the same rearend (8.25/d44 vs d35) and 4x4 if you have 4x4, from a 95 or earlier donor
* transfer case shift linkage and the bracket that bolts onto the transmission/transfer case from an auto 4.0, any year should work I believe but stay 96 or earlier to make sure
* you can just unbolt the clutch pedal from the pedal box. Or leave it in place to confuse thieves.
* shift bezel, linkage, shifter cable, etc as well as the sheetmetal blockoff plate for it that bolts into the floor opening
* trans crossmember from an automatic 4.0 XJ made 87-99 - this may be optional, the standard trans crossmember is like 1/2" to 3/4" different in the height of the mounting bolt pattern for the trans bushing but is otherwise the same. Expect to get this for free or cheap locally, most people pull em off to put an armored/upgraded aftermarket one on.
If you want to do a perfect OEM level install you'll also need a significant portion of wiring harness, an auto TPS (probably best to buy this brand new) from an 87-90, a TCU from an 87-90, and some other stuff I can't quite remember. I wouldn't bother - the RADesigns shifter is pretty nice, it's a few wires to set it up, then you use the factory cable shifter to select P/R/N/D and the RADesigns shifter to select the gear you want while driving.
Save all the nuts and bolts when pulling the parts off the donor, may need them. And make sure you remove the pilot bearing and its bushing before trying to install the transmission (mate the torque converter to the trans, then install them as a unit.) Also, bolt the flexplate up, then have a helper crank the engine over with a breaker bar while watching the CPS tone ring at its edge for runout, there was a bad lot of RENIX flexplates made a while ago and I've had friends have issues with them from the excessive runout. Better to discover that BEFORE getting the transmission in.