The main wiring harness is the same for all the models in a given year. There may be some sub-harnesses for options, for instance the O.H. console wiring may not go up the windshield pillar if you don't have the console, but the plug will be under the dash and probably labeled.
I just discovered the rear door power window and lock wiring on my TWO DOOR with manual windows and locks.
If you don't have footwell lights and tweeters under the dash, pick some up from the J.Y. and plug them in, the wires are already labeled.